CircClock-1999Lel
File Name : CircClock-1999Lel_birhythmic.eml
Summary
Stepper List (1)
System List (2)
Variable List (14)
- /compartment:AA
- /compartment:C
- /compartment:Cn
- /compartment:Dimensions
- /compartment:Mp
- /compartment:Mt
- /compartment:NN
- /compartment:P0
- /compartment:P1
- /compartment:P2
- /compartment:SIZE
- /compartment:T0
- /compartment:T1
- /compartment:T2
Process List (24)
- /:Mp_degradation
- /:Mp_production
- /:Mt_degradation
- /:Mt_production
- /:P0_degradation
- /:P0_production
- /:P0_to_P1
- /:P1_degradation
- /:P1_to_P0
- /:P1_to_T2
- /:P2_degradation
- /:P2_to_P1
- /:PT_complex_degradation
- /:PT_complex_formation
- /:PT_complex_nucleation
- /:PTnucl_complex_degradation
- /:T0_degradation
- /:T0_production
- /:T0_to_T1
- /:T1_degradation
- /:T1_to_T0
- /:T1_to_T2
- /:T2_degradation
- /:T2_to_T1
Stepper
Stepper Class/ID Properties ODE45Stepper
DE# No Property ----- Detail Information
System:/
System Information StepperID DE Name Root System Variable List ID Name Value # No Property Process List Process Class/ID Properties ExpressionFluxProcess
P0_to_P1ID P0_to_P1 Km_1 2.0 V_1 8.0 Expression ( V_1 S0.MolarConc / (Km_1 + S0.MolarConc) ) S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:P0 -1 P0 Variable:/compartment:P1 1 ExpressionFluxProcess
T0_to_T1ID T0_to_T1 Km_2 2.0 V_2 8.0 Expression ( V_2 S0.MolarConc / (Km_2 + S0.MolarConc) ) S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:T0 -1 P0 Variable:/compartment:T1 1 ExpressionFluxProcess
P1_to_P0ID P1_to_P0 Km_3 2.0 V_3 1.0 Expression ( V_3 S0.MolarConc / (Km_3 + S0.MolarConc) ) S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:P1 -1 P0 Variable:/compartment:P0 1 ExpressionFluxProcess
T1_to_T0ID T1_to_T0 Km_4 2.0 V_4 1.0 Expression ( V_4 S0.MolarConc / (Km_4 + S0.MolarConc) ) S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:T1 -1 P0 Variable:/compartment:T0 1 ExpressionFluxProcess
P1_to_T2ID P1_to_T2 Km_5 2.0 V_5 8.0 Expression ( V_5 S0.MolarConc / (Km_5 + S0.MolarConc) ) S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:P1 -1 P0 Variable:/compartment:P2 1 ExpressionFluxProcess
T1_to_T2ID T1_to_T2 Km_6 2.0 V_6 8.0 Expression ( V_6 S0.MolarConc / (Km_6 + S0.MolarConc) ) S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:T1 -1 P0 Variable:/compartment:T2 1 ExpressionFluxProcess
P2_to_P1ID P2_to_P1 Km_7 2.0 V_7 1.0 Expression ( V_7 S0.MolarConc / (Km_7 + S0.MolarConc) ) S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:P2 -1 P0 Variable:/compartment:P1 1 ExpressionFluxProcess
T2_to_T1ID T2_to_T1 Km_8 2.0 V_8 1.0 Expression ( V_8 S0.MolarConc / (Km_8 + S0.MolarConc) ) S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:T2 -1 P0 Variable:/compartment:T1 1 ExpressionFluxProcess
P0_degradationID P0_degradation k_9 0.01 Expression ( k_9 S0.MolarConc ) S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:P0 -1 P0 Variable:/compartment:AA 0 ExpressionFluxProcess
T0_degradationID T0_degradation k_10 0.01 Expression ( k_10 S0.MolarConc ) S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:T0 -1 P0 Variable:/compartment:AA 0 ExpressionFluxProcess
P1_degradationID P1_degradation k_11 0.01 Expression ( k_11 S0.MolarConc ) S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:P1 -1 P0 Variable:/compartment:AA 0 ExpressionFluxProcess
T1_degradationID T1_degradation k_12 0.01 Expression ( k_12 S0.MolarConc ) S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:T1 -1 P0 Variable:/compartment:AA 0 ExpressionFluxProcess
P2_degradationID P2_degradation kd_13 0.01 V_13 2.0 Km_13 0.2 Expression ( kd_13 S0.MolarConc + V_13 S0.MolarConc / (Km_13 + S0.MolarConc) ) * S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:P2 -1 P0 Variable:/compartment:AA 0 ExpressionFluxProcess
T2_degradationID T2_degradation kd_14 0.01 V_14 2.0 Km_14 0.2 Expression ( kd_14 S0.MolarConc + V_14 S0.MolarConc / (Km_14 + S0.MolarConc) ) * S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:T2 -1 P0 Variable:/compartment:AA 0 ExpressionFluxProcess
PT_complex_formationID PT_complex_formation k1_15 1.2 k2_15 0.6 Expression ( k1_15 S0.MolarConc S1.MolarConc - k2_15 P0.MolarConc ) S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:P2 -1 S1 Variable:/compartment:T2 -1 P0 Variable:/compartment:C 1 ExpressionFluxProcess
PT_complex_nucleationID PT_complex_nucleation k1_16 0.6 k2_16 0.2 Expression ( k1_16 S0.MolarConc - k2_16 P0.MolarConc ) * S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:C -1 P0 Variable:/compartment:Cn 1 ExpressionFluxProcess
PT_complex_degradationID PT_complex_degradation k_17 0.01 Expression ( k_17 S0.MolarConc ) S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:C -1 P0 Variable:/compartment:AA 0 ExpressionFluxProcess
PTnucl_complex_degradationID PTnucl_complex_degradation k_18 0.01 Expression ( k_18 S0.MolarConc ) S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:Cn -1 P0 Variable:/compartment:AA 0 ExpressionFluxProcess
Mp_productionID Mp_production V_19 1.0 K_19 1.0 n_19 4.0 Expression ( S0.MolarConc V_19 K_19^n_19 / (K_19^n_19 + C0.MolarConc^n_19) ) * S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:NN 0 P0 Variable:/compartment:Mp 1 C0 Variable:/compartment:Cn 0 ExpressionFluxProcess
Mt_productionID Mt_production V_20 1.0 K_20 1.0 n_20 4.0 Expression ( S0.MolarConc V_20 K_20^n_20 / (K_20^n_20 + C0.MolarConc^n_20) ) * S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:NN 0 P0 Variable:/compartment:Mt 1 C0 Variable:/compartment:Cn 0 ExpressionFluxProcess
P0_productionID P0_production k_21 0.9 Expression ( S0.MolarConc k_21 C0.MolarConc ) * S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:AA 0 P0 Variable:/compartment:P0 1 C0 Variable:/compartment:Mp 0 ExpressionFluxProcess
T0_productionID T0_production k_22 0.9 Expression ( S0.MolarConc k_22 C0.MolarConc ) * S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:AA 0 P0 Variable:/compartment:T0 1 C0 Variable:/compartment:Mt 0 ExpressionFluxProcess
Mp_degradationID Mp_degradation kd_23 0.01 V_23 0.7 Km_23 0.2 Expression ( kd_23 S0.MolarConc + V_23 S0.MolarConc / (Km_23 + S0.MolarConc) ) * S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:Mp -1 P0 Variable:/compartment:NN 0 ExpressionFluxProcess
Mt_degradationID Mt_degradation kd_24 0.01 V_24 0.99 Km_24 0.2 Expression ( kd_24 S0.MolarConc + V_24 S0.MolarConc / (Km_24 + S0.MolarConc) ) * S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:Mt -1 P0 Variable:/compartment:NN 0 System:/compartment
System Information StepperID DE Variable List ID Name Value Dimensions ----- 3 SIZE ----- 1.0 AA ----- 6.0221367e+23 P0 ----- 0.0 T0 ----- 0.0 P1 ----- 0.0 T1 ----- 0.0 P2 ----- 0.0 T2 ----- 0.0 C ----- 0.0 Cn ----- 0.0 NN ----- 6.0221367e+23 Mp ----- 0.0 Mt ----- 0.0 Process List Process Class/ID Properties # No Property
File Name : CircClock-1999Lel_chaotic.eml
Summary
Stepper List (1)
System List (2)
Variable List (14)
- /compartment:AA
- /compartment:C
- /compartment:Cn
- /compartment:Dimensions
- /compartment:Mp
- /compartment:Mt
- /compartment:NN
- /compartment:P0
- /compartment:P1
- /compartment:P2
- /compartment:SIZE
- /compartment:T0
- /compartment:T1
- /compartment:T2
Process List (24)
- /:Mp_degradation
- /:Mp_production
- /:Mt_degradation
- /:Mt_production
- /:P0_degradation
- /:P0_production
- /:P0_to_P1
- /:P1_degradation
- /:P1_to_P0
- /:P1_to_T2
- /:P2_degradation
- /:P2_to_P1
- /:PT_complex_degradation
- /:PT_complex_formation
- /:PT_complex_nucleation
- /:PTnucl_complex_degradation
- /:T0_degradation
- /:T0_production
- /:T0_to_T1
- /:T1_degradation
- /:T1_to_T0
- /:T1_to_T2
- /:T2_degradation
- /:T2_to_T1
Stepper
Stepper Class/ID Properties ODE45Stepper
DE# No Property ----- Detail Information
System:/
System Information StepperID DE Name Root System Variable List ID Name Value # No Property Process List Process Class/ID Properties ExpressionFluxProcess
P0_to_P1ID P0_to_P1 Km_1 2.0 V_1 8.0 Expression ( V_1 S0.MolarConc / (Km_1 + S0.MolarConc) ) S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:P0 -1 P0 Variable:/compartment:P1 1 ExpressionFluxProcess
T0_to_T1ID T0_to_T1 Km_2 2.0 V_2 8.0 Expression ( V_2 S0.MolarConc / (Km_2 + S0.MolarConc) ) S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:T0 -1 P0 Variable:/compartment:T1 1 ExpressionFluxProcess
P1_to_P0ID P1_to_P0 Km_3 2.0 V_3 1.0 Expression ( V_3 S0.MolarConc / (Km_3 + S0.MolarConc) ) S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:P1 -1 P0 Variable:/compartment:P0 1 ExpressionFluxProcess
T1_to_T0ID T1_to_T0 Km_4 2.0 V_4 1.0 Expression ( V_4 S0.MolarConc / (Km_4 + S0.MolarConc) ) S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:T1 -1 P0 Variable:/compartment:T0 1 ExpressionFluxProcess
P1_to_T2ID P1_to_T2 Km_5 2.0 V_5 8.0 Expression ( V_5 S0.MolarConc / (Km_5 + S0.MolarConc) ) S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:P1 -1 P0 Variable:/compartment:P2 1 ExpressionFluxProcess
T1_to_T2ID T1_to_T2 Km_6 2.0 V_6 8.0 Expression ( V_6 S0.MolarConc / (Km_6 + S0.MolarConc) ) S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:T1 -1 P0 Variable:/compartment:T2 1 ExpressionFluxProcess
P2_to_P1ID P2_to_P1 Km_7 2.0 V_7 1.0 Expression ( V_7 S0.MolarConc / (Km_7 + S0.MolarConc) ) S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:P2 -1 P0 Variable:/compartment:P1 1 ExpressionFluxProcess
T2_to_T1ID T2_to_T1 Km_8 2.0 V_8 1.0 Expression ( V_8 S0.MolarConc / (Km_8 + S0.MolarConc) ) S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:T2 -1 P0 Variable:/compartment:T1 1 ExpressionFluxProcess
P0_degradationID P0_degradation k_9 0.01 Expression ( k_9 S0.MolarConc ) S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:P0 -1 P0 Variable:/compartment:AA 0 ExpressionFluxProcess
T0_degradationID T0_degradation k_10 0.01 Expression ( k_10 S0.MolarConc ) S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:T0 -1 P0 Variable:/compartment:AA 0 ExpressionFluxProcess
P1_degradationID P1_degradation k_11 0.01 Expression ( k_11 S0.MolarConc ) S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:P1 -1 P0 Variable:/compartment:AA 0 ExpressionFluxProcess
T1_degradationID T1_degradation k_12 0.01 Expression ( k_12 S0.MolarConc ) S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:T1 -1 P0 Variable:/compartment:AA 0 ExpressionFluxProcess
P2_degradationID P2_degradation kd_13 0.01 V_13 2.0 Km_13 0.2 Expression ( kd_13 S0.MolarConc + V_13 S0.MolarConc / (Km_13 + S0.MolarConc) ) * S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:P2 -1 P0 Variable:/compartment:AA 0 ExpressionFluxProcess
T2_degradationID T2_degradation kd_14 0.01 V_14 4.8 Km_14 0.2 Expression ( kd_14 S0.MolarConc + V_14 S0.MolarConc / (Km_14 + S0.MolarConc) ) * S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:T2 -1 P0 Variable:/compartment:AA 0 ExpressionFluxProcess
PT_complex_formationID PT_complex_formation k1_15 1.2 k2_15 0.6 Expression ( k1_15 S0.MolarConc S1.MolarConc - k2_15 P0.MolarConc ) S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:P2 -1 S1 Variable:/compartment:T2 -1 P0 Variable:/compartment:C 1 ExpressionFluxProcess
PT_complex_nucleationID PT_complex_nucleation k1_16 0.6 k2_16 0.2 Expression ( k1_16 S0.MolarConc - k2_16 P0.MolarConc ) * S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:C -1 P0 Variable:/compartment:Cn 1 ExpressionFluxProcess
PT_complex_degradationID PT_complex_degradation k_17 0.01 Expression ( k_17 S0.MolarConc ) S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:C -1 P0 Variable:/compartment:AA 0 ExpressionFluxProcess
PTnucl_complex_degradationID PTnucl_complex_degradation k_18 0.01 Expression ( k_18 S0.MolarConc ) S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:Cn -1 P0 Variable:/compartment:AA 0 ExpressionFluxProcess
Mp_productionID Mp_production V_19 1.0 K_19 1.0 n_19 4.0 Expression ( S0.MolarConc V_19 K_19^n_19 / (K_19^n_19 + C0.MolarConc^n_19) ) * S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:NN 0 P0 Variable:/compartment:Mp 1 C0 Variable:/compartment:Cn 0 ExpressionFluxProcess
Mt_productionID Mt_production V_20 1.0 K_20 1.0 n_20 4.0 Expression ( S0.MolarConc V_20 K_20^n_20 / (K_20^n_20 + C0.MolarConc^n_20) ) * S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:NN 0 P0 Variable:/compartment:Mt 1 C0 Variable:/compartment:Cn 0 ExpressionFluxProcess
P0_productionID P0_production k_21 0.9 Expression ( S0.MolarConc k_21 C0.MolarConc ) * S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:AA 0 P0 Variable:/compartment:P0 1 C0 Variable:/compartment:Mp 0 ExpressionFluxProcess
T0_productionID T0_production k_22 0.9 Expression ( S0.MolarConc k_22 C0.MolarConc ) * S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:AA 0 P0 Variable:/compartment:T0 1 C0 Variable:/compartment:Mt 0 ExpressionFluxProcess
Mp_degradationID Mp_degradation kd_23 0.01 V_23 0.7 Km_23 0.2 Expression ( kd_23 S0.MolarConc + V_23 S0.MolarConc / (Km_23 + S0.MolarConc) ) * S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:Mp -1 P0 Variable:/compartment:NN 0 ExpressionFluxProcess
Mt_degradationID Mt_degradation kd_24 0.01 V_24 0.28 Km_24 0.2 Expression ( kd_24 S0.MolarConc + V_24 S0.MolarConc / (Km_24 + S0.MolarConc) ) * S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:Mt -1 P0 Variable:/compartment:NN 0 System:/compartment
System Information StepperID DE Variable List ID Name Value Dimensions ----- 3 SIZE ----- 1.0 AA ----- 6.0221367e+23 P0 ----- 0.0 T0 ----- 0.0 P1 ----- 0.0 T1 ----- 0.0 P2 ----- 0.0 T2 ----- 0.0 C ----- 0.0 Cn ----- 0.0 NN ----- 6.0221367e+23 Mp ----- 0.0 Mt ----- 0.0 Process List Process Class/ID Properties # No Property
File Name : CircClock-1999Lel_periodic.eml
Summary
Stepper List (1)
System List (2)
Variable List (14)
- /compartment:AA
- /compartment:C
- /compartment:Cn
- /compartment:Dimensions
- /compartment:Mp
- /compartment:Mt
- /compartment:NN
- /compartment:P0
- /compartment:P1
- /compartment:P2
- /compartment:SIZE
- /compartment:T0
- /compartment:T1
- /compartment:T2
Process List (24)
- /:Mp_degradation
- /:Mp_production
- /:Mt_degradation
- /:Mt_production
- /:P0_degradation
- /:P0_production
- /:P0_to_P1
- /:P1_degradation
- /:P1_to_P0
- /:P1_to_T2
- /:P2_degradation
- /:P2_to_P1
- /:PT_complex_degradation
- /:PT_complex_formation
- /:PT_complex_nucleation
- /:PTnucl_complex_degradation
- /:T0_degradation
- /:T0_production
- /:T0_to_T1
- /:T1_degradation
- /:T1_to_T0
- /:T1_to_T2
- /:T2_degradation
- /:T2_to_T1
Stepper
Stepper Class/ID Properties ODE45Stepper
DE# No Property ----- Detail Information
System:/
System Information StepperID DE Name Root System Variable List ID Name Value # No Property Process List Process Class/ID Properties ExpressionFluxProcess
P0_to_P1ID P0_to_P1 Km_1 2.0 V_1 8.0 Expression ( V_1 S0.MolarConc / (Km_1 + S0.MolarConc) ) S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:P0 -1 P0 Variable:/compartment:P1 1 ExpressionFluxProcess
T0_to_T1ID T0_to_T1 Km_2 2.0 V_2 8.0 Expression ( V_2 S0.MolarConc / (Km_2 + S0.MolarConc) ) S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:T0 -1 P0 Variable:/compartment:T1 1 ExpressionFluxProcess
P1_to_P0ID P1_to_P0 Km_3 2.0 V_3 1.0 Expression ( V_3 S0.MolarConc / (Km_3 + S0.MolarConc) ) S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:P1 -1 P0 Variable:/compartment:P0 1 ExpressionFluxProcess
T1_to_T0ID T1_to_T0 Km_4 2.0 V_4 1.0 Expression ( V_4 S0.MolarConc / (Km_4 + S0.MolarConc) ) S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:T1 -1 P0 Variable:/compartment:T0 1 ExpressionFluxProcess
P1_to_T2ID P1_to_T2 Km_5 2.0 V_5 8.0 Expression ( V_5 S0.MolarConc / (Km_5 + S0.MolarConc) ) S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:P1 -1 P0 Variable:/compartment:P2 1 ExpressionFluxProcess
T1_to_T2ID T1_to_T2 Km_6 2.0 V_6 8.0 Expression ( V_6 S0.MolarConc / (Km_6 + S0.MolarConc) ) S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:T1 -1 P0 Variable:/compartment:T2 1 ExpressionFluxProcess
P2_to_P1ID P2_to_P1 Km_7 2.0 V_7 1.0 Expression ( V_7 S0.MolarConc / (Km_7 + S0.MolarConc) ) S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:P2 -1 P0 Variable:/compartment:P1 1 ExpressionFluxProcess
T2_to_T1ID T2_to_T1 Km_8 2.0 V_8 1.0 Expression ( V_8 S0.MolarConc / (Km_8 + S0.MolarConc) ) S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:T2 -1 P0 Variable:/compartment:T1 1 ExpressionFluxProcess
P0_degradationID P0_degradation k_9 0.01 Expression ( k_9 S0.MolarConc ) S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:P0 -1 P0 Variable:/compartment:AA 0 ExpressionFluxProcess
T0_degradationID T0_degradation k_10 0.01 Expression ( k_10 S0.MolarConc ) S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:T0 -1 P0 Variable:/compartment:AA 0 ExpressionFluxProcess
P1_degradationID P1_degradation k_11 0.01 Expression ( k_11 S0.MolarConc ) S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:P1 -1 P0 Variable:/compartment:AA 0 ExpressionFluxProcess
T1_degradationID T1_degradation k_12 0.01 Expression ( k_12 S0.MolarConc ) S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:T1 -1 P0 Variable:/compartment:AA 0 ExpressionFluxProcess
P2_degradationID P2_degradation kd_13 0.01 V_13 2.0 Km_13 0.2 Expression ( kd_13 S0.MolarConc + V_13 S0.MolarConc / (Km_13 + S0.MolarConc) ) * S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:P2 -1 P0 Variable:/compartment:AA 0 ExpressionFluxProcess
T2_degradationID T2_degradation kd_14 0.01 V_14 2.0 Km_14 0.2 Expression ( kd_14 S0.MolarConc + V_14 S0.MolarConc / (Km_14 + S0.MolarConc) ) * S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:T2 -1 P0 Variable:/compartment:AA 0 ExpressionFluxProcess
PT_complex_formationID PT_complex_formation k1_15 1.2 k2_15 0.6 Expression ( k1_15 S0.MolarConc S1.MolarConc - k2_15 P0.MolarConc ) S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:P2 -1 S1 Variable:/compartment:T2 -1 P0 Variable:/compartment:C 1 ExpressionFluxProcess
PT_complex_nucleationID PT_complex_nucleation k1_16 0.6 k2_16 0.2 Expression ( k1_16 S0.MolarConc - k2_16 P0.MolarConc ) * S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:C -1 P0 Variable:/compartment:Cn 1 ExpressionFluxProcess
PT_complex_degradationID PT_complex_degradation k_17 0.01 Expression ( k_17 S0.MolarConc ) S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:C -1 P0 Variable:/compartment:AA 0 ExpressionFluxProcess
PTnucl_complex_degradationID PTnucl_complex_degradation k_18 0.01 Expression ( k_18 S0.MolarConc ) S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:Cn -1 P0 Variable:/compartment:AA 0 ExpressionFluxProcess
Mp_productionID Mp_production V_19 1.0 K_19 1.0 n_19 4.0 Expression ( S0.MolarConc V_19 K_19^n_19 / (K_19^n_19 + C0.MolarConc^n_19) ) * S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:NN 0 P0 Variable:/compartment:Mp 1 C0 Variable:/compartment:Cn 0 ExpressionFluxProcess
Mt_productionID Mt_production V_20 1.0 K_20 1.0 n_20 4.0 Expression ( S0.MolarConc V_20 K_20^n_20 / (K_20^n_20 + C0.MolarConc^n_20) ) * S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:NN 0 P0 Variable:/compartment:Mt 1 C0 Variable:/compartment:Cn 0 ExpressionFluxProcess
P0_productionID P0_production k_21 0.9 Expression ( S0.MolarConc k_21 C0.MolarConc ) * S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:AA 0 P0 Variable:/compartment:P0 1 C0 Variable:/compartment:Mp 0 ExpressionFluxProcess
T0_productionID T0_production k_22 0.9 Expression ( S0.MolarConc k_22 C0.MolarConc ) * S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:AA 0 P0 Variable:/compartment:T0 1 C0 Variable:/compartment:Mt 0 ExpressionFluxProcess
Mp_degradationID Mp_degradation kd_23 0.01 V_23 0.7 Km_23 0.2 Expression ( kd_23 S0.MolarConc + V_23 S0.MolarConc / (Km_23 + S0.MolarConc) ) * S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:Mp -1 P0 Variable:/compartment:NN 0 ExpressionFluxProcess
Mt_degradationID Mt_degradation kd_24 0.01 V_24 0.7 Km_24 0.2 Expression ( kd_24 S0.MolarConc + V_24 S0.MolarConc / (Km_24 + S0.MolarConc) ) * S0.getSuperSystem().SizeN_A VariableReferenceList S0 Variable:/compartment:Mt -1 P0 Variable:/compartment:NN 0 System:/compartment
System Information StepperID DE Variable List ID Name Value Dimensions ----- 3 SIZE ----- 1.0 AA ----- 6.0221367e+23 P0 ----- 0.0 T0 ----- 0.0 P1 ----- 0.0 T1 ----- 0.0 P2 ----- 0.0 T2 ----- 0.0 C ----- 0.0 Cn ----- 0.0 NN ----- 6.0221367e+23 Mp ----- 0.0 Mt ----- 0.0 Process List Process Class/ID Properties # No Property

