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E-Cell Models
These models in the table below are E-Cell models constructed in E-Cell Project. You can link to a page containing a summary of the model when you click a model name, and publications describing the model when you click publications. A link to each E-Cell Project page, a publication, E-Cell and SBML models, the person who created these model are shown in a page containing a summary of the model. This page also provides links for downloading the model's definition in E-Cell and SBML models.
- Mitochondrion (Katsuyuki Yugi, 2004)
- [ DESCRIPTION ]
- Katsuyuki Yugi and Masaru Tomita, A general computational model of mitochondrial metabolism in a whole organelle scale.
Bioinformatics. 2004 Jul 22;20(11):1795-6. Epub 2004 Feb 12 - download E-Cell model
- Luo-Rudy Model(cardiac myocyte)
- Faber, G M and Rudy Y, Action potential and contractility changes in [Na(+)](i) overloaded cardiac myocytes: a simulation study. Biophys J. 2000 May;78(5):2392-404.
- download E-Cell model
- Kyoto Model (Matsuoka S, Sarai N, Jo H, Noma A 2004)
- Matsuoka S, Sarai N, Jo H, Noma A. Simulation of ATP metabolism in cardiac excitation-contraction coupling.
Prog Biophys Mol Biol. 2004 Jun-Jul;85(2-3):279-99. - Sarai N, Matsuoka S, Kuratomi S, Ono K, Noma A. Role of individual ionic current systems in the SA node hypothesized by a model study. Jpn J Physiol. 2003 Apr;53(2):125-34.
- Matsuoka S, Sarai N, Kuratomi S, Ono K, Noma A. Role of individual ionic current systems in ventricular cells hypothesized by a model study. Jpn J Physiol. 2003 Apr;53(2):105-23.
- download E-Cell model
- Circadian Rhythm Ogawa et. al. 2008 : download
